Project Highlights

SDSC serves as a critical cyberinfrastructure partner to large scale research projects.

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BurnPro3D

A century of suppressing wildfires has created a dangerous accumulation of flammable vegetation on landscapes, contributing to megafires that risk human life and destroy ecosystems. Prescribed burns can dramatically reduce the risk of large fires that are uncontrollable by decreasing this buildup of fuels. BurnPro3D is a science-driven, decision-support platform to help the fire management community understand risks and tradeoffs quickly and accurately when planning and conducting prescribed burns.

Visit BurnPro3D Website

SDSC Expertise

  • High-Performance Computing
  • Data Management
  • Software Development

Principal Investigator(s)

  • İlkay Altıntaş, SDSC
  • J. Kevin Hiers (Co-PI), Tall Timbers Research Station
  • Rodman Linn (Co-PI), SDSC
  • Yolanda Gil (Co-PI), USC

Partners

  • Multiple

Funding

  • U.S. National Science Foundation Grant 
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Center for Academic Research and Training in Anthropogeny

The Center for Academic Research and Training in Anthropogeny (CARTA) is a virtual organization formed in order to promote transdisciplinary research into human origins, drawing on methods from a number of traditional disciplines spanning the humanities, social, biomedical, biological, computational & engineering and physical & chemical sciences.

Visit CARTA website

SDSC Expertise

  • Data Management and Storage
  • Software Development
  • Cybersecurity

Principal Investigator(s)

  • Pascal Gagneux, UC San Diego

Partners

  • UC San Diego
  • Salk Institute

Funding

  • Private donorship
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CIPRES

CIPRES is the premiere online resource for phylogenetics, systematics and evolutionary biology. CIPRES was created with the goal of providing biologists around the world with seamless access to HPC resources and high-performance parallel codes for sequence assembly to tree inference and more.
 
Visit CIPRES Website

SDSC Expertise

  • High-Performance Computing

Principal Investigator(s)

Partners

  • ACCESS
  • Simons Foundation
  • U.S. National Science Foundation

Funding

  • U.S. National Science Foundation Grants NSF DBI 221163 and OAC 2138259, 2138286, 2138307, 2137603 and 2138296
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High Performance Wireless Research and Education Network

The High Performance Wireless Research and Education Network (HPWREN) at SDSC is a unique wireless network that provides high-speed Internet connectivity to remote and underserved areas of Southern California. It supports critical research in fields like seismology, environmental science and wildfire monitoring, while also providing valuable services to first responders and the public. HPWREN is a collaborative project that leverages advanced wireless technologies to connect researchers, educators and communities in challenging terrains.

Visit HPWREN Website

SDSC Expertise

  • Wireless Networking
  • Cybersecurity
  • Data Management
  • High-Performance Computing

Principal Investigator(s)

  • Frank Vernon, SIO

Partners

  • Text

Funding

  • U.S. National Science Foundation Grant #XXXXX
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Neuroscience Gateway

The Neuroscience Gateway (NSG) is a cloud platform that provides neuroscientists with access to high-performance and high-throughput computing resources. It simplifies the process of running complex simulations and analyzing large datasets, enabling researchers to make significant advancements in understanding the brain.

Visit NSG Website

SDSC Expertise

  • High-Performance Computing
  • High-Throughput Computing
  • Cloud

Principal Investigator(s)

Partners

  • University of California San Diego
  • Yale University
  • University College London

Funding

  • U.S. National Science Foundation
  • U.S. National Institute of Health
  • U.K. Biotechnology and Biological Sciences Research Council
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NOURISH

The NOURISH project aims to address food deserts by creating an AI-powered platform. This platform will help small businesses in underserved communities access funding, optimize store locations, navigate permitting processes and source local ingredients more affordably. By leveraging data science and technology, NOURISH aims to improve food access and promote healthier communities.

View NOURISH News Post

SDSC Expertise

  • Community Engagement
  • Data Management
  • Software Development

Principal Investigator(s)

  • Laura Schmidt, UC San Francisco
  • Amarnath Gupta (Co-PI), SDSC
  • Matthew Lange (Co-PI), UC Davis
  • Tera Fazzino (Co-PI), University of Kansas
  • Paul Watson (Co-PI), Global Action Research Center

Partners

  • University of California San Diego
  • University of California San Francisco

Funding

  • U.S. National Science Foundation
  • U.S. Department of Agriculture
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OpenTopography

OpenTopography, a science gateway that advances understanding of the Earth’s surface, vegetation and built environment, is a comprehensive platform for open access to high-resolution (one meter pixel resolution or better) and global topographic data that is utilized by an international community of researchers, educators, government agencies, industry and hobbyists.

Visit OpenTopography Website

SDSC Expertise

  • High-Performance Computing
  • Data Management and Storage
  • Networking
  • Software Development

Principal Investigator(s)

  • Viswanath Nandigam, SDSC
  • Christopher Crosby, Earthscope Consortium
  • Chelsea Scott, ASU
  • J Ramon Arrowsmith, ASU

Partners

  • EarthScope Consortium
  • School of Earth and Space Exploration, ASU 

Funding

  • U.S. National Science Foundation Grant #2410799
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RCSB Protein Data Bank

The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is a global repository for 3D structures of biological macromolecules like proteins and DNA. It provides researchers, educators and students with access to this critical data, enabling them to study the shape and interactions of these molecules, which is fundamental to understanding biological processes and developing new medicines.

Visit RCSB Website

SDSC Expertise

  • High-Performance Computing
  • Data Management and Storage
  • Cyberinfrastructure

UC San Diego Lead

Partners

  • Rutgers
  • University of California San Diego
  • University of California San Francisco

Funding

  • U.S. National Science Foundation
  • U.S. Department of Energy
  • National Cancer Institute, National Institutes of Health
  • National Institute of Allergy and Infectious Diseases, National Institutes of Health
  • National Institute of General Medical Sciences, National Institutes of Health
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Statewide California Earthquake Center

The Statewide California Earthquake Center (SCEC) is a multi-institutional research program dedicated to understanding earthquakes and reducing earthquake risk. SCEC’s study area spans the entire Pacific-North American plate boundary. SCEC conducts cutting-edge research, develops advanced earthquake models and provides crucial information to policymakers and the public for earthquake preparedness and mitigation.

Visit SCEC Website

SDSC Expertise

  • High-Performance Computing
  • Data Management and Storage
  • Software Development

SCEC Board of Directors

Partners

  • Multiple

Funding

  • U.S. National Science Foundation
  • USGS
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